Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm10013-201ENSMUST00000106074 672 ntBASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm7213-201ENSMUST00000215977 950 ntBASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6n-6A0A075B6B2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm22697-201ENSMUST00000175194 63 ntBASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm27000-201ENSMUST00000182943 842 ntBASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6n-6A0A075B6B2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms