Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6d-7A0A075B6B0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6d-7A0A075B6B0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6d-7A0A075B6B0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6d-7A0A075B6B0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav6d-7A0A075B6B0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm36967-201ENSMUST00000193814 266 ntBASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Sybu-209ENSMUST00000228639 4113 ntBASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.07□□□□□ -0.48
Trav6d-7A0A075B6B0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms