Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-1A0A075B699 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-1A0A075B699 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-1A0A075B699 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-1A0A075B699 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms