Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav5-4A0A075B652 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav5-4A0A075B652 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav5-4A0A075B652 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav5-4A0A075B652 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav5-4A0A075B652 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Mir7071-201ENSMUST00000184847 69 ntBASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav5-4A0A075B652 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Gm11950-201ENSMUST00000121615 838 ntBASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Gm25016-201ENSMUST00000158399 131 ntBASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-4A0A075B652 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms