Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm10052-201ENSMUST00000168019 960 ntBASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm29257-201ENSMUST00000186115 639 ntBASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm7729-201ENSMUST00000050143 801 ntBASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm10812-201ENSMUST00000099864 546 ntBASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm13436-201ENSMUST00000120418 567 ntBASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm44430-201ENSMUST00000203376 995 ntBASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.77□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm6257-201ENSMUST00000163864 910 ntBASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.75□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms