Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16nA0A075B634 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav16nA0A075B634 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.83□□□□□ -0.52
Trav16nA0A075B634 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav16nA0A075B634 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16nA0A075B634 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trav16nA0A075B634 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms