Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8n-2A0A075B633 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8n-2A0A075B633 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Gm43474-201ENSMUST00000196415 774 ntBASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Gm43125-201ENSMUST00000201724 730 ntBASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8n-2A0A075B633 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Gm25948-201ENSMUST00000175334 112 ntBASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Mir7023-201ENSMUST00000185093 64 ntBASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8n-2A0A075B633 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Gm27430-201ENSMUST00000184585 107 ntBASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Gm27321-201ENSMUST00000185021 205 ntBASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Gm44333-201ENSMUST00000197168 107 ntBASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms