Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Gm18959-201ENSMUST00000208954 655 ntBASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6-1A0A075B5Z8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm22240-201ENSMUST00000175225 82 ntBASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm37055-201ENSMUST00000191866 133 ntBASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm21559-201ENSMUST00000220638 855 ntBASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm8587-201ENSMUST00000076538 843 ntBASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-1A0A075B5Z8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm11355-201ENSMUST00000121120 306 ntBASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Gm9987-201ENSMUST00000069768 567 ntBASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-1A0A075B5Z8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-1A0A075B5Z8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-1A0A075B5Z8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Trav6-1A0A075B5Z8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-1A0A075B5Z8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav6-1A0A075B5Z8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav6-1A0A075B5Z8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-1A0A075B5Z8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms