Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm14140-201ENSMUST00000119999 995 ntBASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm27628-201ENSMUST00000184911 107 ntBASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 AW822252-206ENSMUST00000208904 237 ntBASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm5364-201ENSMUST00000216789 889 ntBASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-1A0A075B5Z7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm9682-201ENSMUST00000197505 556 ntBASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav5-1A0A075B5Z7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms