Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Dancr-204ENSMUST00000132389 2347 ntBASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col13a1Q9R1N9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col13a1Q9R1N9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col13a1Q9R1N9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col13a1Q9R1N9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col13a1Q9R1N9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col13a1Q9R1N9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.27□□□□□ -0.28
Col13a1Q9R1N9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col13a1Q9R1N9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col13a1Q9R1N9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col13a1Q9R1N9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms