Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.11■□□□□ 0.33
Nek3Q9R0A5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Efs-202ENSMUST00000227037 2540 ntBASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.1■□□□□ 0.33
Nek3Q9R0A5 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nek3Q9R0A5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Gm6433-201ENSMUST00000118634 875 ntBASIC17.09■□□□□ 0.33
Nek3Q9R0A5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Nek3Q9R0A5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nek3Q9R0A5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nek3Q9R0A5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nek3Q9R0A5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nek3Q9R0A5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nek3Q9R0A5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nek3Q9R0A5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Gm14722-201ENSMUST00000118943 689 ntBASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Gm9013-201ENSMUST00000132939 882 ntBASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek3Q9R0A5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms