Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clcn2Q9R0A1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16■□□□□ 0.15
Clcn2Q9R0A1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16■□□□□ 0.15
Clcn2Q9R0A1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Clcn2Q9R0A1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16■□□□□ 0.15
Clcn2Q9R0A1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16■□□□□ 0.15
Clcn2Q9R0A1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Clcn2Q9R0A1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Mir3081-201ENSMUST00000175305 84 ntBASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Gm28033-201ENSMUST00000184224 96 ntBASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Gm44430-201ENSMUST00000203376 995 ntBASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Clcn2Q9R0A1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Clcn2Q9R0A1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.96■□□□□ 0.15
Clcn2Q9R0A1 Gm18669-201ENSMUST00000216049 778 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms