Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phtf1Q9QZ09 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.12■□□□□ 0.33
Phtf1Q9QZ09 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Gm7222-201ENSMUST00000117512 906 ntBASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 AV026068-213ENSMUST00000223675 1171 ntBASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Gm15590-201ENSMUST00000078419 552 ntBASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phtf1Q9QZ09 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Gm13036-201ENSMUST00000117799 748 ntBASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Gm18733-201ENSMUST00000173950 856 ntBASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Phtf1Q9QZ09 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms