Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Gm14494-201ENSMUST00000118786 435 ntBASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Gm14140-201ENSMUST00000119999 995 ntBASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Gm27628-201ENSMUST00000184911 107 ntBASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom3Q9QXN0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Gm5682-201ENSMUST00000173402 505 ntBASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Gm15590-201ENSMUST00000078419 552 ntBASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom3Q9QXN0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Gm27646-201ENSMUST00000183989 110 ntBASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom3Q9QXN0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom3Q9QXN0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom3Q9QXN0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom3Q9QXN0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom3Q9QXN0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms