Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Asic1-205ENSMUST00000228185 1818 ntBASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh5Q9QUM7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Gm18719-201ENSMUST00000196696 1413 ntBASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Gm14776-201ENSMUST00000121029 887 ntBASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh5Q9QUM7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh5Q9QUM7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh5Q9QUM7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh5Q9QUM7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh5Q9QUM7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Msh5Q9QUM7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh5Q9QUM7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh5Q9QUM7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh5Q9QUM7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh5Q9QUM7 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh5Q9QUM7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms