Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Gm28033-201ENSMUST00000184224 96 ntBASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a2Q9JLR1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Gm27357-201ENSMUST00000183754 135 ntBASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sec61a2Q9JLR1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sec61a2Q9JLR1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sec61a2Q9JLR1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Sec61a2Q9JLR1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sec61a2Q9JLR1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sec61a2Q9JLR1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Gm18669-201ENSMUST00000216049 778 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms