Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem1Q9JKE2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Gm15375-201ENSMUST00000119510 849 ntBASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Gm10138-203ENSMUST00000206952 366 ntBASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.06□□□□□ -0.16
Trem1Q9JKE2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem1Q9JKE2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms