Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.4□□□□□ -0.1
Dap3Q9ER88 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Dap3Q9ER88 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.4□□□□□ -0.1
Dap3Q9ER88 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.4□□□□□ -0.1
Dap3Q9ER88 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Dap3Q9ER88 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.39□□□□□ -0.11
Dap3Q9ER88 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.39□□□□□ -0.11
Dap3Q9ER88 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.39□□□□□ -0.11
Dap3Q9ER88 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Dap3Q9ER88 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Dap3Q9ER88 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Dap3Q9ER88 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.38□□□□□ -0.11
Dap3Q9ER88 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dap3Q9ER88 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.37□□□□□ -0.11
Dap3Q9ER88 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.37□□□□□ -0.11
Dap3Q9ER88 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Gm7213-201ENSMUST00000215977 950 ntBASIC14.37□□□□□ -0.11
Dap3Q9ER88 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.37□□□□□ -0.11
Dap3Q9ER88 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.37□□□□□ -0.11
Dap3Q9ER88 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dap3Q9ER88 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms