Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lime1Q9EQR5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Gm6345-202ENSMUST00000180900 204 ntBASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.59□□□□□ -0.23
Lime1Q9EQR5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lime1Q9EQR5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lime1Q9EQR5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lime1Q9EQR5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lime1Q9EQR5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Lime1Q9EQR5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Lime1Q9EQR5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lime1Q9EQR5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Gm15794-201ENSMUST00000120182 631 ntBASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lime1Q9EQR5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lime1Q9EQR5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lime1Q9EQR5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lime1Q9EQR5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lime1Q9EQR5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lime1Q9EQR5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms