Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm15693-201ENSMUST00000120470 637 ntBASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-4Q9EQM3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-4Q9EQM3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Gm13453-201ENSMUST00000118708 357 ntBASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Mir7684-201ENSMUST00000183858 60 ntBASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-4Q9EQM3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Gm6973-201ENSMUST00000117080 721 ntBASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Gm8410-201ENSMUST00000117225 605 ntBASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Gm2272-201ENSMUST00000194903 582 ntBASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Gm6888-201ENSMUST00000221983 706 ntBASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-4Q9EQM3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
Nkx2-4Q9EQM3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Nkx2-4Q9EQM3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms