Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Gm28760-201ENSMUST00000185995 736 ntBASIC17.61■□□□□ 0.41
Upf1Q9EPU0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf1Q9EPU0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Gm8318-201ENSMUST00000182954 872 ntBASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upf1Q9EPU0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Mir1897-201ENSMUST00000122581 272 ntBASIC17.59■□□□□ 0.41
Upf1Q9EPU0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Gm3436-201ENSMUST00000179930 840 ntBASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Gm37466-201ENSMUST00000195692 652 ntBASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Gm46209-201ENSMUST00000217912 553 ntBASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upf1Q9EPU0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Upf1Q9EPU0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Gm27701-201ENSMUST00000184498 110 ntBASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.58■□□□□ 0.4
Upf1Q9EPU0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Gm9797-201ENSMUST00000052902 613 ntBASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upf1Q9EPU0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upf1Q9EPU0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Gm21854-201ENSMUST00000179901 471 ntBASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.57■□□□□ 0.4
Upf1Q9EPU0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upf1Q9EPU0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms