Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp2aQ9DB34 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.33■□□□□ 0.21
Chmp2aQ9DB34 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp2aQ9DB34 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.33■□□□□ 0.21
Chmp2aQ9DB34 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2aQ9DB34 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gm44357-201ENSMUST00000195897 142 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gm19658-201ENSMUST00000196231 138 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gm44367-201ENSMUST00000196836 138 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gm44350-201ENSMUST00000197197 138 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gm44390-201ENSMUST00000197533 144 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gm44313-201ENSMUST00000198018 138 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gm44486-201ENSMUST00000198508 138 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gm44314-201ENSMUST00000199263 138 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gm44394-201ENSMUST00000199558 138 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gm44484-201ENSMUST00000199873 138 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gm44466-201ENSMUST00000200264 138 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gm44359-201ENSMUST00000200671 138 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2aQ9DB34 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Gm8097-201ENSMUST00000117903 829 ntBASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Gm12497-201ENSMUST00000138778 237 ntBASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Gm6257-201ENSMUST00000163864 910 ntBASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2aQ9DB34 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Mir8098-201ENSMUST00000184011 137 ntBASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 App-207ENSMUST00000227737 2827 ntBASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms