Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Rsph3bQ9DA80 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Gm45167-201ENSMUST00000208007 322 ntBASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rsph3bQ9DA80 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rsph3bQ9DA80 Dancr-204ENSMUST00000132389 2347 ntBASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rsph3bQ9DA80 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rsph3bQ9DA80 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rsph3bQ9DA80 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rsph3bQ9DA80 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rsph3bQ9DA80 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rsph3bQ9DA80 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rsph3bQ9DA80 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rsph3bQ9DA80 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rsph3bQ9DA80 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms