Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco2Q9DA21 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco2Q9DA21 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Smco2Q9DA21 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.6■□□□□ 0.41
Smco2Q9DA21 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.6■□□□□ 0.41
Smco2Q9DA21 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.6■□□□□ 0.41
Smco2Q9DA21 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.6■□□□□ 0.41
Smco2Q9DA21 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco2Q9DA21 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco2Q9DA21 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Smco2Q9DA21 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco2Q9DA21 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Smco2Q9DA21 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.6■□□□□ 0.41
Smco2Q9DA21 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.59■□□□□ 0.41
Smco2Q9DA21 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco2Q9DA21 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smco2Q9DA21 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smco2Q9DA21 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smco2Q9DA21 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smco2Q9DA21 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Psmb5-202ENSMUST00000227257 622 ntBASIC17.58■□□□□ 0.4
Smco2Q9DA21 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco2Q9DA21 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.58■□□□□ 0.4
Smco2Q9DA21 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smco2Q9DA21 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.57■□□□□ 0.4
Smco2Q9DA21 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.57■□□□□ 0.4
Smco2Q9DA21 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Gm7222-201ENSMUST00000117512 906 ntBASIC17.57■□□□□ 0.4
Smco2Q9DA21 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.57■□□□□ 0.4
Smco2Q9DA21 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.57■□□□□ 0.4
Smco2Q9DA21 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Smco2Q9DA21 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco2Q9DA21 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Smco2Q9DA21 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.56■□□□□ 0.4
Smco2Q9DA21 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco2Q9DA21 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco2Q9DA21 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco2Q9DA21 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Smco2Q9DA21 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smco2Q9DA21 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Smco2Q9DA21 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.56■□□□□ 0.4
Smco2Q9DA21 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco2Q9DA21 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco2Q9DA21 Gm13036-201ENSMUST00000117799 748 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms