Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm11355-201ENSMUST00000121120 306 ntBASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Gm9768-201ENSMUST00000206007 2861 ntBASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp5Q9D7S9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.55■□□□□ 0.72
Chmp5Q9D7S9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp5Q9D7S9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Gm45133-201ENSMUST00000207548 2773 ntBASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Gm22697-201ENSMUST00000175194 63 ntBASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp5Q9D7S9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp5Q9D7S9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms