Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
Upk3bl1Q9D701 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3bl1Q9D701 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3bl1Q9D701 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.27□□□□□ -0.12
Upk3bl1Q9D701 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.27□□□□□ -0.13
Upk3bl1Q9D701 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Gm38027-201ENSMUST00000192315 235 ntBASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Gm18115-201ENSMUST00000221209 621 ntBASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3bl1Q9D701 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Gm12134-201ENSMUST00000122109 520 ntBASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Gm27275-201ENSMUST00000184318 272 ntBASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Gm44450-201ENSMUST00000199528 114 ntBASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Gm7791-201ENSMUST00000219066 539 ntBASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3bl1Q9D701 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Gm18421-201ENSMUST00000204122 625 ntBASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 CT009738.1-201ENSMUST00000219031 809 ntBASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms