Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Gm2559-201ENSMUST00000201323 363 ntBASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ShpkQ9D5J6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ShpkQ9D5J6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ShpkQ9D5J6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
ShpkQ9D5J6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ShpkQ9D5J6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Dio3-201ENSMUST00000097228 1449 ntBASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ShpkQ9D5J6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ShpkQ9D5J6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ShpkQ9D5J6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ShpkQ9D5J6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ShpkQ9D5J6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ShpkQ9D5J6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms