Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Gm10499-201ENSMUST00000174094 934 ntBASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Gm43474-201ENSMUST00000196415 774 ntBASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx29Q9D3S3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Snx29Q9D3S3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Snx29Q9D3S3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Snx29Q9D3S3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.08■□□□□ 0.33
Snx29Q9D3S3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Snx29Q9D3S3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx29Q9D3S3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 AA543401-201ENSMUST00000164248 1269 ntBASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Gm43125-201ENSMUST00000201724 730 ntBASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Snx29Q9D3S3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Gm18057-201ENSMUST00000208220 503 ntBASIC17.06■□□□□ 0.32
Snx29Q9D3S3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Snx29Q9D3S3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snx29Q9D3S3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.05■□□□□ 0.32
Snx29Q9D3S3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Snx29Q9D3S3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snx29Q9D3S3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms