Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd1lQ9CXF7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd1lQ9CXF7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd1lQ9CXF7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.71■□□□□ 0.43
Chd1lQ9CXF7 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.71■□□□□ 0.42
Chd1lQ9CXF7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.71■□□□□ 0.42
Chd1lQ9CXF7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Chd1lQ9CXF7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.42
Chd1lQ9CXF7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Gm715-201ENSMUST00000117865 831 ntBASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd1lQ9CXF7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd1lQ9CXF7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Gm21814-202ENSMUST00000203277 873 ntBASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1lQ9CXF7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1lQ9CXF7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1lQ9CXF7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1lQ9CXF7 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.67■□□□□ 0.42
Chd1lQ9CXF7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.67■□□□□ 0.42
Chd1lQ9CXF7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Chd1lQ9CXF7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1lQ9CXF7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1lQ9CXF7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1lQ9CXF7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms