Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx47Q9CWX9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx47Q9CWX9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Gm3375-201ENSMUST00000203929 796 ntBASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Gm7370-201ENSMUST00000219471 767 ntBASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx47Q9CWX9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Gm13168-201ENSMUST00000121771 632 ntBASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx47Q9CWX9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Gm22240-201ENSMUST00000175225 82 ntBASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Odf3b-204ENSMUST00000227834 930 ntBASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx47Q9CWX9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms