Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc3Q9CW03 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc3Q9CW03 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smc3Q9CW03 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc3Q9CW03 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc3Q9CW03 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc3Q9CW03 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc3Q9CW03 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc3Q9CW03 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.4■□□□□ 0.54
Smc3Q9CW03 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.4■□□□□ 0.54
Smc3Q9CW03 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.4■□□□□ 0.54
Smc3Q9CW03 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Smc3Q9CW03 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smc3Q9CW03 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Gm11950-201ENSMUST00000121615 838 ntBASIC18.39■□□□□ 0.53
Smc3Q9CW03 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.39■□□□□ 0.53
Smc3Q9CW03 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smc3Q9CW03 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smc3Q9CW03 BC037039-201ENSMUST00000192003 2205 ntBASIC18.38■□□□□ 0.53
Smc3Q9CW03 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smc3Q9CW03 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc3Q9CW03 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc3Q9CW03 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc3Q9CW03 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms