Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1aQ9CU62 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1aQ9CU62 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smc1aQ9CU62 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smc1aQ9CU62 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc1aQ9CU62 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc1aQ9CU62 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smc1aQ9CU62 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smc1aQ9CU62 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smc1aQ9CU62 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Gm18206-201ENSMUST00000207027 926 ntBASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.45■□□□□ 0.38
Smc1aQ9CU62 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms