Protein–RNA interactions for Protein: Q9CSU0

Rprd1b, Regulation of nuclear pre-mRNA domain-containing protein 1B, mousemouse

Known RBP Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1bQ9CSU0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Rprd1bQ9CSU0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Gm43799-201ENSMUST00000201845 579 ntBASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Gm45058-201ENSMUST00000205810 766 ntBASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rprd1bQ9CSU0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rprd1bQ9CSU0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rprd1bQ9CSU0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms