Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Gm15165-201ENSMUST00000118140 502 ntBASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Gm33142-201ENSMUST00000193913 867 ntBASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Gm7367-201ENSMUST00000057611 492 ntBASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lrrc40Q9CRC8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.53■□□□□ 0.08
Lrrc40Q9CRC8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Gm7284-201ENSMUST00000131667 944 ntBASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.52■□□□□ 0.08
Lrrc40Q9CRC8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lrrc40Q9CRC8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lrrc40Q9CRC8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Lrrc40Q9CRC8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lrrc40Q9CRC8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lrrc40Q9CRC8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lrrc40Q9CRC8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Gm15372-201ENSMUST00000120729 834 ntBASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Gm27357-201ENSMUST00000183754 135 ntBASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lrrc40Q9CRC8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms