Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Gm11950-201ENSMUST00000121615 838 ntBASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rer1Q9CQU3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Rer1Q9CQU3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Gm25016-201ENSMUST00000158399 131 ntBASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Gm6257-201ENSMUST00000163864 910 ntBASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Gm45328-201ENSMUST00000210942 917 ntBASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rer1Q9CQU3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Gm17808-201ENSMUST00000200859 894 ntBASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rer1Q9CQU3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms