Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm7Q9CQQ8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm7Q9CQQ8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm7Q9CQQ8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm7Q9CQQ8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm7Q9CQQ8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm7Q9CQQ8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm7Q9CQQ8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm7Q9CQQ8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm7Q9CQQ8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Lsm7Q9CQQ8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm7Q9CQQ8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm7Q9CQQ8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Gm15467-201ENSMUST00000120582 445 ntBASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Lsm7Q9CQQ8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm7Q9CQQ8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Gm18489-201ENSMUST00000172565 551 ntBASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Gm2213-201ENSMUST00000197485 688 ntBASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm7Q9CQQ8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms