Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim33Q99PP7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trim33Q99PP7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim33Q99PP7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim33Q99PP7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim33Q99PP7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim33Q99PP7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim33Q99PP7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Trim33Q99PP7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim33Q99PP7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim33Q99PP7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.51■□□□□ 0.07
Trim33Q99PP7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.51■□□□□ 0.07
Trim33Q99PP7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim33Q99PP7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim33Q99PP7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Gm12644-201ENSMUST00000119935 606 ntBASIC15.49■□□□□ 0.07
Trim33Q99PP7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Gm25745-201ENSMUST00000174945 133 ntBASIC15.49■□□□□ 0.07
Trim33Q99PP7 Gm17971-201ENSMUST00000190239 806 ntBASIC15.49■□□□□ 0.07
Trim33Q99PP7 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.49■□□□□ 0.07
Trim33Q99PP7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim33Q99PP7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms