Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Gm9824-201ENSMUST00000178707 561 ntBASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Gm18766-201ENSMUST00000189811 808 ntBASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Gm8515-201ENSMUST00000194852 576 ntBASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.79■□□□□ 0.12
Cdh23Q99PF4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh23Q99PF4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh23Q99PF4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh23Q99PF4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh23Q99PF4 Gm14042-201ENSMUST00000120139 833 ntBASIC15.77■□□□□ 0.12
Cdh23Q99PF4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh23Q99PF4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.77■□□□□ 0.12
Cdh23Q99PF4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh23Q99PF4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh23Q99PF4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh23Q99PF4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Cdh23Q99PF4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.77■□□□□ 0.12
Cdh23Q99PF4 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.77■□□□□ 0.12
Cdh23Q99PF4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh23Q99PF4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh23Q99PF4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh23Q99PF4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh23Q99PF4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh23Q99PF4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh23Q99PF4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh23Q99PF4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Gm29667-201ENSMUST00000190817 490 ntBASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cdh23Q99PF4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms