Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RtcbQ99LF4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RtcbQ99LF4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RtcbQ99LF4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RtcbQ99LF4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RtcbQ99LF4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RtcbQ99LF4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RtcbQ99LF4 Gm11424-201ENSMUST00000121929 829 ntBASIC19.24■□□□□ 0.67
RtcbQ99LF4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RtcbQ99LF4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RtcbQ99LF4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RtcbQ99LF4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RtcbQ99LF4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RtcbQ99LF4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RtcbQ99LF4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Gm12151-201ENSMUST00000121374 290 ntBASIC19.23■□□□□ 0.67
RtcbQ99LF4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.23■□□□□ 0.67
RtcbQ99LF4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RtcbQ99LF4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Gm13223-201ENSMUST00000118609 747 ntBASIC19.22■□□□□ 0.67
RtcbQ99LF4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.22■□□□□ 0.67
RtcbQ99LF4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.22■□□□□ 0.67
RtcbQ99LF4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RtcbQ99LF4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RtcbQ99LF4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.21■□□□□ 0.67
RtcbQ99LF4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.21■□□□□ 0.67
RtcbQ99LF4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Gm15693-201ENSMUST00000120470 637 ntBASIC19.21■□□□□ 0.67
RtcbQ99LF4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RtcbQ99LF4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.21■□□□□ 0.67
RtcbQ99LF4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RtcbQ99LF4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RtcbQ99LF4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RtcbQ99LF4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RtcbQ99LF4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RtcbQ99LF4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RtcbQ99LF4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
RtcbQ99LF4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.2■□□□□ 0.66
RtcbQ99LF4 Gm6973-201ENSMUST00000117080 721 ntBASIC19.2■□□□□ 0.66
RtcbQ99LF4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RtcbQ99LF4 Gm10499-201ENSMUST00000174094 934 ntBASIC19.2■□□□□ 0.66
RtcbQ99LF4 Gm27618-201ENSMUST00000183671 60 ntBASIC19.2■□□□□ 0.66
RtcbQ99LF4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.2■□□□□ 0.66
RtcbQ99LF4 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.2■□□□□ 0.66
RtcbQ99LF4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RtcbQ99LF4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms