Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.96□□□□□ -0.17
Thumpd1Q99J36 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Thumpd1Q99J36 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.96□□□□□ -0.18
Thumpd1Q99J36 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd1Q99J36 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd1Q99J36 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd1Q99J36 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd1Q99J36 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd1Q99J36 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd1Q99J36 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd1Q99J36 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd1Q99J36 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd1Q99J36 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Thumpd1Q99J36 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.95□□□□□ -0.18
Thumpd1Q99J36 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Thumpd1Q99J36 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Thumpd1Q99J36 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms