Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1aQ921W0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1aQ921W0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1aQ921W0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.84□□□□□ -0.19
Chmp1aQ921W0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1aQ921W0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Chmp1aQ921W0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.84□□□□□ -0.19
Chmp1aQ921W0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1aQ921W0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Chmp1aQ921W0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp1aQ921W0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp1aQ921W0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp1aQ921W0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.83□□□□□ -0.19
Chmp1aQ921W0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Gm11336-201ENSMUST00000118168 334 ntBASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.83□□□□□ -0.2
Chmp1aQ921W0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.83□□□□□ -0.2
Chmp1aQ921W0 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Chmp1aQ921W0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp1aQ921W0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Gm15039-201ENSMUST00000118914 875 ntBASIC13.81□□□□□ -0.2
Chmp1aQ921W0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp1aQ921W0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms