Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.71■□□□□ 0.59
Sf3b3Q921M3 Gm25948-201ENSMUST00000175334 112 ntBASIC18.71■□□□□ 0.59
Sf3b3Q921M3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.71■□□□□ 0.59
Sf3b3Q921M3 Gm10154-201ENSMUST00000084445 354 ntBASIC18.71■□□□□ 0.59
Sf3b3Q921M3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3b3Q921M3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.71■□□□□ 0.59
Sf3b3Q921M3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3b3Q921M3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3b3Q921M3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3b3Q921M3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3b3Q921M3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3b3Q921M3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
Sf3b3Q921M3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Sf3b3Q921M3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm22065-201ENSMUST00000103753 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm22066-201ENSMUST00000103761 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm24932-201ENSMUST00000103763 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm24115-201ENSMUST00000103799 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm22190-201ENSMUST00000103827 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm22191-201ENSMUST00000103831 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm24721-201ENSMUST00000103849 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm28018-201ENSMUST00000103869 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm26399-201ENSMUST00000103937 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Mir449b-201ENSMUST00000104833 80 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm25349-201ENSMUST00000177728 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm23616-201ENSMUST00000177797 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm25871-201ENSMUST00000177816 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm24752-201ENSMUST00000178240 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm24496-201ENSMUST00000178287 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm25649-201ENSMUST00000178476 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm25548-201ENSMUST00000178681 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm23147-201ENSMUST00000178841 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm26095-201ENSMUST00000179270 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm22171-201ENSMUST00000179283 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm23936-201ENSMUST00000179354 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm22619-201ENSMUST00000179516 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm25255-201ENSMUST00000179579 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm24755-201ENSMUST00000179691 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm26506-201ENSMUST00000179692 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm25086-201ENSMUST00000179931 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm23243-201ENSMUST00000180047 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm24659-201ENSMUST00000180212 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm24169-201ENSMUST00000180244 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm23689-201ENSMUST00000180354 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm27359-201ENSMUST00000184153 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm27785-201ENSMUST00000184268 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm27466-201ENSMUST00000184396 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm27703-201ENSMUST00000184836 110 ntBASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3b3Q921M3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3b3Q921M3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3b3Q921M3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3b3Q921M3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3b3Q921M3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms