Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc1bQ920F6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smc1bQ920F6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.02■□□□□ 0.48
Smc1bQ920F6 Mir8117-201ENSMUST00000184773 107 ntBASIC18.02■□□□□ 0.48
Smc1bQ920F6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc1bQ920F6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smc1bQ920F6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smc1bQ920F6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.01■□□□□ 0.47
Smc1bQ920F6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.01■□□□□ 0.47
Smc1bQ920F6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.01■□□□□ 0.47
Smc1bQ920F6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Gm5186-201ENSMUST00000218781 920 ntBASIC18.01■□□□□ 0.47
Smc1bQ920F6 Gm8655-201ENSMUST00000221159 852 ntBASIC18.01■□□□□ 0.47
Smc1bQ920F6 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.01■□□□□ 0.47
Smc1bQ920F6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc1bQ920F6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Smc1bQ920F6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18■□□□□ 0.47
Smc1bQ920F6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18■□□□□ 0.47
Smc1bQ920F6 Chchd1-203ENSMUST00000224633 557 ntBASIC18■□□□□ 0.47
Smc1bQ920F6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18■□□□□ 0.47
Smc1bQ920F6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Smc1bQ920F6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.99■□□□□ 0.47
Smc1bQ920F6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc1bQ920F6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms