Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb20Q91XZ9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Gm25109-201ENSMUST00000122474 114 ntBASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Gm11780-201ENSMUST00000136880 516 ntBASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Gm37073-201ENSMUST00000192469 1222 ntBASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Gm44771-201ENSMUST00000206975 626 ntBASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb20Q91XZ9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Gm15968-201ENSMUST00000119342 1168 ntBASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Gm7230-201ENSMUST00000173026 815 ntBASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Gm44146-201ENSMUST00000203508 816 ntBASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb20Q91XZ9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Gm6089-201ENSMUST00000197666 938 ntBASIC15.13■□□□□ 0.01
Pcdhb20Q91XZ9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms