Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Gm29518-201ENSMUST00000190858 372 ntBASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb4Q91XZ6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Gm17808-201ENSMUST00000200859 894 ntBASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb4Q91XZ6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 AA414768-201ENSMUST00000121924 1257 ntBASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb4Q91XZ6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Gm13836-201ENSMUST00000121159 501 ntBASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb4Q91XZ6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms