Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb17Q91VD8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb17Q91VD8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb17Q91VD8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb17Q91VD8 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC16.3■□□□□ 0.2
Pcdhb17Q91VD8 Gm43980-201ENSMUST00000204899 1612 ntBASIC16.3■□□□□ 0.2
Pcdhb17Q91VD8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb17Q91VD8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb17Q91VD8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb17Q91VD8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb17Q91VD8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb17Q91VD8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb17Q91VD8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Mir8098-201ENSMUST00000184011 137 ntBASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Gm28659-201ENSMUST00000188013 759 ntBASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb17Q91VD8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Gm11780-201ENSMUST00000136880 516 ntBASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb17Q91VD8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Gm37073-201ENSMUST00000192469 1222 ntBASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb17Q91VD8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb17Q91VD8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb17Q91VD8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb17Q91VD8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb17Q91VD8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdhb17Q91VD8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb17Q91VD8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb17Q91VD8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb17Q91VD8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb17Q91VD8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb17Q91VD8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb17Q91VD8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.26■□□□□ 0.19
Pcdhb17Q91VD8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb17Q91VD8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb17Q91VD8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb17Q91VD8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms