Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H1fooQ8VIK3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Gm27742-201ENSMUST00000184667 60 ntBASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
H1fooQ8VIK3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Olfr129-201ENSMUST00000122318 993 ntBASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Rprl3-201ENSMUST00000157400 290 ntBASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.1□□□□□ -0.31
H1fooQ8VIK3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H1fooQ8VIK3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms