Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh18Q8VHR0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh18Q8VHR0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh18Q8VHR0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh18Q8VHR0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 BC037039-201ENSMUST00000192003 2205 ntBASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Mir6982-201ENSMUST00000184354 68 ntBASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh18Q8VHR0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Gm13559-201ENSMUST00000120476 863 ntBASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh18Q8VHR0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh18Q8VHR0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh18Q8VHR0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh18Q8VHR0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh18Q8VHR0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh18Q8VHR0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh18Q8VHR0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh18Q8VHR0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh18Q8VHR0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh18Q8VHR0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh18Q8VHR0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh18Q8VHR0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms