Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab40cQ8VHQ4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rab40cQ8VHQ4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.81□□□□□ -0.36
Rab40cQ8VHQ4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rab40cQ8VHQ4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rab40cQ8VHQ4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rab40cQ8VHQ4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rab40cQ8VHQ4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rab40cQ8VHQ4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.81□□□□□ -0.36
Rab40cQ8VHQ4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab40cQ8VHQ4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab40cQ8VHQ4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Gm3375-201ENSMUST00000203929 796 ntBASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab40cQ8VHQ4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab40cQ8VHQ4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab40cQ8VHQ4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab40cQ8VHQ4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms