Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.69■□□□□ 0.1
Vps39Q8R5L3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Rprl3-201ENSMUST00000157400 290 ntBASIC15.68■□□□□ 0.1
Vps39Q8R5L3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps39Q8R5L3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Gm13836-201ENSMUST00000121159 501 ntBASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps39Q8R5L3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Gm25406-201ENSMUST00000157599 105 ntBASIC15.66■□□□□ 0.1
Vps39Q8R5L3 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps39Q8R5L3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms